The two major São Paulo train stations are Luz and Julio Prestes in the Luz/Campos Eliseos region. Luz is the seat of the Santos-Jundiaí line which historically transported international immigrants from the Santos port to São Paulo and the coffee plantation lands in the Western region of Campinas. Julio Prestes connected the SW São Paulo State and Northern Paraná State to São Paulo and products were transferred to Luz Station from which they headed to the Atlantic ocean and overseas. Julio Prestes ceased from transporting passengers through the Sorocabana or FEPASA lines and now only has limited suburban service. Due to its acoustics and the beauty of its interior, surrounded by Greek revival columns, part of the rebuilt station was transformed into the São Paulo Hall, or Sala São Paulo, home of the internationally, known São Paulo Orchestra.
Luz Station, which was built in Britain and assembled in Brazil, has an underground station and is still very active with east and westbound suburban trains that link São Paulo to the Greater São Paulo region to the East and the Campinas Metropolitan region in Jundiaí in the western part of the State. Besides housing the interactive Museu da Língua Portuguesa (Portuguese Language Museum), Luz Station is surrounded by important cultural institutions such as the Pinacoteca do Estado, The Museu de Arte Sacra on Tiradentes Avenue and Jardim da Luz, among others.

Although poorly maintained by heavy rail services, there is an infrastructure project to build a high-speed railway service linking Brazil's two largest cities, São Paulo and Rio de Janeiro. The trains would go as fast as 280 kilometres per hour (170 mph) (the trip would last about 1 hour and 30 minutes). This specific project is still waiting an official announcement by the Brazilian government, who is trying to obtain international financing through a public-private partnership.
Another important project is the "Expresso Bandeirantes," which is a medium-speed rail service (about 160 km/h) from São Paulo to Campinas, which would reduce the journey time from the current one hour and a half by car to about 50 minutes by train, linking the towns of São Paulo, Jundiaí, Campinas Airport, and Campinas city center. This service is also going to be connected to the railway service between São Paulo city center and Guarulhos Airport. Major works on an express railway service between São Paulo city center and Guarulhos International Airport were announced by the São Paulo state government in 2007, which will be a milestone in the revitalisation and improvement of the Brazilian passenger railway services.